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Create a plot of reflectance data

Source: R/functions.R
wisp_plot_reflectance_data.Rd

[Stable] This function generates an interactive visualization of all spectral signatures contained in a dataset, based on the plotly library. It is highly flexible and can be used to display: raw data downloaded directly from WISPstation, processed data after QC, processed data after SR. The function’s distinctive feature is its dynamic tooltip system: when hovering over a spectral curve, users can instantly visualize the corresponding acquisition date and time, together with all associated bio-optical parameters computed for that specific measurement.

Usage

wisp_plot_reflectance_data(
  data,
  legend_TSM = TRUE,
  legend_Chla = TRUE,
  legend_Kd = TRUE,
  legend_cpc = TRUE,
  legend_scatt = FALSE,
  legend_ratio = FALSE,
  legend_novoa_SPM = FALSE,
  legend_novoa_TUR = FALSE,
  legend_jiang_TSS = FALSE,
  legend_gons_CHL = FALSE,
  legend_gons740_CHL = FALSE,
  legend_NDCI = FALSE,
  legend_mishra_CHL = FALSE,
  legend_hue_angle = FALSE,
  legend_dom_wavelength = FALSE,
  legend_OWT_class = FALSE,
  legend_OWT_score = FALSE,
  legend_OWT_z_dist = FALSE
)

Arguments

data

A tibble obtained by any of the functions provided by this package: wisp_get_reflectance_data(), or after QC and SR removal operations.

legend_TSM

A logical. If TRUE, the plot legend includes the TSM values. Default is TRUE.

legend_Chla

A logical. If TRUE, the plot legend includes the Chla values. Default is TRUE.

legend_Kd

A logical. If TRUE, the plot legend includes the Kd values. Default is TRUE.

legend_cpc

A logical. If TRUE, the plot legend includes the cpc values. Default is TRUE.

legend_scatt

A logical. If TRUE, the plot legend includes the scattering values. Default is FALSE.

legend_ratio

A logical. If TRUE, the plot legend includes the ratio values. Default is FALSE.

legend_novoa_SPM

A logical. If TRUE, the plot legend includes the Novoa_SPMvalues. Default is FALSE.

legend_novoa_TUR

A logical. If TRUE, the plot legend includes the Novoa_TURvalues. Default is FALSE.

legend_jiang_TSS

A logical. If TRUE, the plot legend includes the Jiang_TSSvalues. Default is FALSE.

legend_gons_CHL

A logical. If TRUE, the plot legend includes the Gons_CHLvalues. Default is FALSE.

legend_gons740_CHL

A logical. If TRUE, the plot legend includes the Gons740_CHLvalues. Default is FALSE.

legend_NDCI

A logical. If TRUE, the plot legend includes the NDCIvalues. Default is FALSE.

legend_mishra_CHL

A logical. If TRUE, the plot legend includes the Mishra_CHLvalues. Default is FALSE.

legend_hue_angle

A logical. If TRUE, the plot legend includes the Hue_Anglevalues. Default is FALSE.

legend_dom_wavelength

A logical. If TRUE, the plot legend includes the Dominant_Wavelengthvalues. Default is FALSE.

legend_OWT_class

A logical. If TRUE, the plot legend includes the OWT_class. Default is FALSE.

legend_OWT_score

A logical. If TRUE, the plot legend includes the OWT_score (membership grade). Default is FALSE.

legend_OWT_z_dist

A logical. If TRUE, the plot legend includes the OWT_z_dist (statistical distance). Default is FALSE.

Value

An interactive plot showing the spectral signatures of the reflectance data.

Author

Alessandro Oggioni, phD oggioni.a@irea.cnr.it

Nicola Ghirardi, phD nicola.ghirardi@cnr.it

Examples

# example code
if (FALSE) { # \dontrun{
## Not run:
wisp_plot_reflectance_data(
  data = reflect_data_sr,
  legend_TSM = TRUE,
  legend_Chla = TRUE,
  legend_Kd = TRUE,
  legend_cpc = TRUE,
  legend_scatt = FALSE,
  legend_ratio = FALSE,
  legend_novoa_SPM = FALSE,
  legend_novoa_TUR = FALSE,
  legend_jiang_TSS = FALSE,
  legend_gons_CHL  = FALSE,
  legend_gons740_CHL = FALSE,
  legend_NDCI = FALSE,
  legend_mishra_CHL = FALSE,
  legend_hue_angle = FALSE, 
  legend_dom_wavelength = FALSE,
  legend_OWT_class = FALSE,
  legend_OWT_score = FALSE,
  legend_OWT_z_dist = FALSE  
)
} # }
## End (Not run)